| Protein ZmHB26 | |
|---|---|
|
ZmHB26 is a protein in the Homeobox family.
|
|
| Information | |
| TF Name: | ZmHB26 |
| Species: | Maize |
| TF Family: | Homeobox |
| Gene Name(Synonym): | HB26 |
| Uniprot ID: | A0A1D6PDQ1 |
| Subgenome: | 2 |
Protein ZmHB26
ZmHB26 is a protein in the Homeobox family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.
| Overview of domains present in v5 transcripts | |||
|---|---|---|---|
| PF00805 | PF13576 | PF13599 | |
| Zm00001eb335810_T001 |  | | |
| Zm00001eb335810_T002 | | | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d008612 | DAPseq |  |
sequence | fimo | position |
| Zm00001d008612 | DAPseq |  |
sequence | fimo | position |
| Zm00001d008612 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d008612 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmHB26 is the regulator
Interactions where ZmHB26 is the target
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Zm00001eb335810_T001 from maize genome v5
Amino Acid Sequence
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MAILGALRLAPSPPALAGAAPPATSPYTAVRSSVHFRLANAGAAALVAASLLAADPAVAFIGGGPYGKQVTRGQDLTGKD
FSGQTLIKQDFKTSILRQANFKGANLLGASFFDADLTSADLSDADLRGADLSLANLTKANLSNANLEGALATGNTSFKGA
DITGADFTDVPLRDDQREYLCKIADGVNSTTGNPTKETLFCS
MAILGALRLAPSPPALAGAAPPATSPYTAVRSSVHFRLANAGAAALVAASLLAADPAVAFIGGGPYGKQVTRGQDLTGKD
FSGQTLIKQDFKTSILRQANFKGANLLGASFFDADLTSADLSDADLRGADLSLANLTKANLSNANLEGALATGNTSFKGA
DITGADFTDVPLRDDQREYLCKIADGVNSTTGNPTKETLFCS
MAILGALRLAPSPPALAGAAPPATSPYTAVRSSVHFRLANAGAAALVAASLLAADPAVAFIGGGPYGKQVTRGQDLTGKD
FSGQTLIKQDFKTSILRQANFKGANLLGASFFDADLTSADLSDADLRGADLSLANLTKANLSNANLEGALATGNTSFKGA
DITGADFTDVPLRDDQREYLCKIADGVNSTTGNPTKETLFCS
MAILGALRLAPSPPALAGAAPPATSPYTAVRSSVHFRLANAGAAALVAASLLAADPAVAFIGGGPYGKQVTRGQDLTGKD
FSGQTLIKQDFKTSILRQANFKGANLLGASFFDADLTSADLSDADLRGADLSLANLTKANLSNANLEGALATGNTSFKGA
DITGADFTDVPLRDDQREYLCKIADGVNSTTGNPTKETLFCS
MAILGALRLAPSPPALAGAAPPATSPYTAVRSSVHFRLANAGAAALVAASLLAADPAVAFIGGGPYGKQVTRGQDLTGKD
FSGQTLIKQDFKTSILRQANFKGANLLGASFFDADLTSADLSDADLRGADLSLANLTKANLSNANLEGALATGNTSFKGA
DITGADFTDVPLRDDQREYLCKIADGVNSTTGNPTKETLFCS
MAILGALRLAPSPPALAGAAPPATSPYTAVRSSVHFRLANAGAAALVAASLLAADPAVAFIGGGPYGKQVTRGQDLTGKD
FSGQTLIKQDFKTSILRQANFKGANLLGASFFDADLTSADLSDADLRGADLSLANLTKANLSNANLEGALATGNTSFKGA
DITGADFTDVPLRDDQREYLCKIADGVNSTTGNPTKETLFCS
MAILGALRLAPSPPALAGAAPPATSPYTAVRSSVHFRLANAGAAALVAASLLAADPAVAFIGGGPYGKQVTRGQDLTGKD
FSGQTLIKQDFKTSILRQANFKGANLLGASFFDADLTSADLSDADLRGADLSLANLTKANLSNANLEGALATGNTSFKGA
DITGADFTDVPLRDDQREYLCKIADGVNSTTGNPTKETLFCS
MAILGALRLAPSPPALAGAAPPATSPYTAVRSSVHFRLANAGAAALVAASLLAADPAVAFIGGGPYGKQVTRGQDLTGKD
FSGQTLIKQDFKTSILRQANFKGANLLGASFFDADLTSADLSDADLRGADLSLANLTKANLSNANLEGALATGNTSFKGA
DITGADFTDVPLRDDQREYLCKIADGVNSTTGNPTKETLFCS
MAILGALRLAPSPPALAGAAPPATSPYTAVRSSVHFRLANAGAAALVAASLLAADPAVAFIGGGPYGKQVTRGQDLTGKD
FSGQTLIKQDFKTSILRQANFKGANLLGASFFDADLTSADLSDADLRGADLSLANLTKANLSNANLEGALATGNTSFKGA
DITGADFTDVPLRDDQREYLCKIADGVNSTTGNPTKETLFCS
MAILGALRLAPSPPALAGAAPPATSPYTAVRSSVHFRLANAGAAALVAASLLAADPAVAFIGGGPYGKQVTRGQDLTGKD
FSGQTLIKQDFKTSILRQANFKGANLLGASFFDADLTSADLSDADLRGADLSLANLTKANLSNANLEGALATGNTSFKGA
DITGADFTDVPLRDDQREYLCKIADGVNSTTGNPTKETLFCS
MAILGALRLAPSPPALAGAAPPATSPYTAVRSSVHFRLANAGAAALVAASLLAADPAVAFIGGGPYGKQVTRGQDLTGKD
FSGQTLIKQDFKTSILRQANFKGANLLGASFFDADLTSADLSDADLRGADLSLANLTKANLSNANLEGALATGNTSFKGA
DITGADFTDVPLRDDQREYLCKIADGVNSTTGNPTKETLFCS
MAILGALRLAPSPPALAGAAPPATSPYTAVRSSVHFRLANAGAAALVAASLLAADPAVAFIGGGPYGKQVTRGQDLTGKD
FSGQTLIKQDFKTSILRQANFKGANLLGASFFDADLTSADLSDADLRGADLSLANLTKANLSNANLEGALATGNTSFKGA
DITGADFTDVPLRDDQREYLCKIADGVNSTTGNPTKETLFCS
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF00805 |
|
| PF13599 |
|
| PF13576 |
|
| PF00805 |
|
| PF00805 |
|
| PF00805 |
|
| PF13576 |
|
| PF13599 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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AAAACAGATAAGGCGGATGGACACA...
AAAACAGATAAGGCGGATGGACACACGGCAGCCTAGAAGGAAACAGGAACAGACAGCTCTGAAAGACTGAAACTCACGGCCATGGCCATCCTGGGTGCCCTCAGGCTCGCGCCGTCTCCACCCGCCCTCGCCGGCGCCGCGCCACCGGCGACGTCGCCGTATACGGCTGTACGCTCCTCCGTGCACTTCCGCCTCGCCAATGCCGGCGCCGCCGCGCTCGTCGCCGCCTCGCTCCTCGCCGCCGACCCCGCCGTGGCTTTCATTGGAGGAGGACCGTACGGGAAGCAGGTGACGCGGGGGCAGGACCTCACCGGCAAGGACTTCAGCGGCCAGACACTCATCAAGCAGGACTTCAAGACGTCTATACTGAGGCAGGCGAACTTCAAAGGCGCGAACCTGCTCGGCGCGAGCTTCTTCGATGCAGACCTCACAAGCGCTGATCTCTCTGACGCTGATCTTAGAGGCGCTGATTTGTCGCTGGCGAATTTAACGAAGGCAAACTTATCAAATGCCAACTTAGAAGGGGCACTTGCCACTGGGAACACTTCTTTCAAAGGTGCCGACATAACTGGGGCAGATTTTACCGATGTGCCGCTGCGAGATGATCAACGGGAGTACCTCTGCAAAATCGCTGACGGAGTAAATTCAACCACTGGAAACCCAACAAAGGAGACTCTGTTCTGCAGCTGATCGACGGAAGGACCTGGGACTTGTGACTTATTCAACGTCTTGATAAACTTGCATCTGCTGCTGTAAGCACGTGAGGAATGTAAATTGAGTTATAGAGGGTTCCTAGAAATAATAACTGGTAATTACGTGTAAATCAACCAACAATATAAGTGTGTGCTGCCCTTTGAATGTGCAAACGATTTTTTATTACAACTCAAATAGTTGTGGTTCTTCAAGCACTAGAGACGCTTAAAGATACAATTTGATAAAAGCAAGTTAATAAT
GRMZM2G010929_T01 from maize genome v3
Amino Acid Sequence
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MAILGALRLAPSPPALAGAAPPATSPYTAVRSSVHFRLANAGAAALVAASLLAADPAVAFIGGGPYGKQVTRGQDLTGKD
FSGQTLIKQDFKTSILRQANFKGANLLGASFFDADLTSADLSDADLRGADLSLANLTKANLSNANLEGALATGNTSFKGA
DITGADFTDVPLRDDQREYLCKIADGVNSTTGNPTKETLFCS
Nucleotide Sequence
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AGCCTAGAAGGAAACAGGAACAGAC...
AGCCTAGAAGGAAACAGGAACAGACAGCTCTGAAAGACTGAAACTCACGGCCATGGCCATCCTGGGTGCCCTCAGGCTCGCGCCGTCTCCACCCGCCCTCGCCGGCGCCGCGCCACCGGCGACGTCGCCGTATACGGCTGTACGCTCCTCCGTGCACTTCCGCCTCGCCAATGCCGGCGCCGCCGCGCTCGTCGCCGCCTCGCTCCTCGCCGCCGACCCCGCCGTGGCTTTCATTGGAGGAGGACCGTACGGGAAGCAGGTGACGCGGGGGCAGGACCTCACCGGCAAGGACTTCAGCGGCCAGACACTCATCAAGCAGGACTTCAAGACGTCTATACTGAGGCAGGCGAACTTCAAAGGCGCGAACCTGCTCGGCGCGAGCTTCTTCGATGCAGACCTCACAAGCGCTGATCTCTCTGACGCTGATCTTAGAGGCGCTGATTTGTCGCTGGCGAATTTAACGAAGGCAAACTTATCAAATGCCAACTTAGAAGGGGCACTTGCCACTGGGAACACTTCTTTCAAAGGTGCCGACATAACTGGGGCAGATTTTACCGATGTGCCGCTGCGAGATGATCAACGGGAGTACCTCTGCAAAATCGCTGACGGAGTAAATTCAACCACTGGAAACCCAACAAAGGAGACTCTGTTCTGCAGCTGATCGACGGAAGGACCTGGGACTTGTGACTTATTCAACGTCTTGATAAACTTGCATCTGCTGCTGTAAGCACGTGAGGAATGTAAATTGAGTTATAGAGGGTTCCTAGAAATAATAACTGGTAATTACGTGTAAATCAACCAACAATATAAGTGTGTGCTGCCCTTTGAATGTGCAAA
GRMZM2G010929_T02 from maize genome v3
Amino Acid Sequence
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MAILGALRLAPSPPALAGAAPPATSPYTAVRSSVHFRLANAGAAALVAASLLAADPAVAFIGGGPYGKQVTRGQDLTGKD
FSGQTLIKQDFKTSILRQANFKGANLLGASFFDADLTSADLSDADLRGADLSLANLTKANLSNANLEGALATGNTSFKDF
TDVPLRDDQREYLCKIADGWRCLQYITFGTKDQVRFGYLSREVENFHKFLSFVTRGFIIIGSIPKWRGETNLGGAGRWRD
RAEEVEADANDSTAIAAASIAHGNPSPARSPALTRESGGAGGGAGGGSGSVVASAVCRPSGSRWTPTLEQIRMLKELYYG
CDIRSPSSEQIQRITAMLRQHGKIEGKNVFYWFQNHKARERQKRRLTGSTSWPRGGRGARLERGRDRDGRGVVRGDGGRG
RDSARRGEGRGDGAQGGDDAGGAQIAWRGGANRVRGGRR
Nucleotide Sequence
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AGCCTAGAAGGAAACAGGAACAGAC...
AGCCTAGAAGGAAACAGGAACAGACAGCTCTGAAAGACTGAAACTCACGGCCATGGCCATCCTGGGTGCCCTCAGGCTCGCGCCGTCTCCACCCGCCCTCGCCGGCGCCGCGCCACCGGCGACGTCGCCGTATACGGCTGTACGCTCCTCCGTGCACTTCCGCCTCGCCAATGCCGGCGCCGCCGCGCTCGTCGCCGCCTCGCTCCTCGCCGCCGACCCCGCCGTGGCTTTCATTGGAGGAGGACCGTACGGGAAGCAGGTGACGCGGGGGCAGGACCTCACCGGCAAGGACTTCAGCGGCCAGACACTCATCAAGCAGGACTTCAAGACGTCTATACTGAGGCAGGCGAACTTCAAAGGCGCGAACCTGCTCGGCGCGAGCTTCTTCGATGCAGACCTCACAAGCGCTGATCTCTCTGACGCTGATCTTAGAGGCGCTGATTTGTCGCTGGCGAATTTAACGAAGGCAAACTTATCAAATGCCAACTTAGAAGGGGCACTTGCCACTGGGAACACTTCTTTCAAAGATTTTACCGATGTGCCGCTGCGAGATGATCAACGGGAGTACCTCTGCAAAATCGCTGACGGATGGAGATGTTTACAGTACATTACCTTTGGAACAAAAGACCAGGTTCGCTTTGGGTATTTATCACGAGAAGTTGAGAACTTCCACAAGTTTCTTAGTTTTGTCACAAGAGGTTTCATTATTATTGGCTCTATACCTAAATGGAGAGGAGAGACAAACCTAGGCGGCGCTGGTAGATGGCGAGATCGGGCCGAGGAAGTCGAGGCAGATGCAAACGACAGCACTGCCATCGCCGCTGCTTCCATCGCCCACGGAAACCCTAGCCCCGCACGCTCTCCCGCCCTCACACGCGAGAGTGGTGGCGCCGGCGGTGGAGCGGGAGGAGGCAGCGGCAGCGTGGTGGCGTCGGCGGTGTGCCGCCCCAGCGGCTCGCGGTGGACGCCGACGCTGGAGCAGATCAGGATGCTGAAGGAGCTCTACTACGGCTGCGACATCCGGTCGCCCAGCTCGGAGCAGATCCAGCGCATCACCGCCATGCTGCGCCAGCACGGCAAGATCGAGGGCAAGAACGTCTTCTATTGGTTCCAGAACCACAAGGCCCGCGAGCGCCAGAAGCGCCGCCTCACAGGATCTACGTCGTGGCCTCGCGGGGGGCGGGGGGCGAGATTGGAGAGGGGCAGGGACCGGGATGGGAGAGGGGTGGTACGAGGAGACGGAGGACGGGGAAGAGACAGCGCCAGACGCGGAGAAGGGCGAGGAGACGGAGCACAGGGAGGAGACGATGCTGGGGGTGCGCAAATCGCGTGGCGTGGGGGCGCAAATCGCGTGCGAGGAGGACGACGGTAG
Zm00001d008612_T001 from maize genome v4
Amino Acid Sequence
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MAILGALRLAPSPPALAGAAPPATSPYTAVRSSVHFRLANAGAAALVAASLLAADPAVAFIGGGPYGKQVTRGQDLTGKD
FSGQTLIKQDFKTSILRQANFKGANLLGASFFDADLTSADLSDADLRGADLSLANLTKANLSNANLEGALATGNTSFKDF
TDVPLRDDQREYLCKIADGVNSTTGNPTKETLFCS
Nucleotide Sequence
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AGCCTAGAAGGAAACAGGAACAGAC...
AGCCTAGAAGGAAACAGGAACAGACAGCTCTGAAAGACTGAAACTCACGGCCATGGCCATCCTGGGTGCCCTCAGGCTCGCGCCGTCTCCACCCGCCCTCGCCGGCGCCGCGCCACCGGCGACGTCGCCGTATACGGCTGTACGCTCCTCCGTGCACTTCCGCCTCGCCAATGCCGGCGCCGCCGCGCTCGTCGCCGCCTCGCTCCTCGCCGCCGACCCCGCCGTGGCTTTCATTGGAGGAGGACCGTACGGGAAGCAGGTGACGCGGGGGCAGGACCTCACCGGCAAGGACTTCAGCGGCCAGACACTCATCAAGCAGGACTTCAAGACGTCTATACTGAGGCAGGCGAACTTCAAAGGCGCGAACCTGCTCGGCGCGAGCTTCTTCGATGCAGACCTCACAAGCGCTGATCTCTCTGACGCTGATCTTAGAGGCGCTGATTTGTCGCTGGCGAATTTAACGAAGGCAAACTTATCAAATGCCAACTTAGAAGGGGCACTTGCCACTGGGAACACTTCTTTCAAAGATTTTACCGATGTGCCGCTGCGAGATGATCAACGGGAGTACCTCTGCAAAATCGCTGACGGAGTAAATTCAACCACTGGAAACCCAACAAAGGAGACTCTGTTCTGCAGCTGATCGACGGAAGGACCTGGGACTTGTGACTTATTCAACGTCTTGATAAACTTGCATCTGCTGCTGTAAGCACGTGAGGAATGTAAATTGAGTTATAGAGGGTTCCTAGAAATAATAACTGGTAATTACGTGTAAATCAACCAACAATATAAGTGTGTGCTGCCCTTTGAATGTGCAAA
Zm00001d008612_T002 from maize genome v4
Amino Acid Sequence
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MAILGALRLAPSPPALAGAAPPATSPYTAVRSSVHFRLANAGAAALVAASLLAADPAVAFIGGGPYGKQVTRGQDLTGKD
FSGQTLIKQDFKTSILRQANFKGANLLGASFFDADLTSADLSDADLRGADLSLANLTKANLSNANLEGALATGNTSFKGA
DITGADFTDVPLRDDQREYLCKIADGVNSTTGNPTKETLFCS
Nucleotide Sequence
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AGGAACAGACAGCTCTGAAAGACTG...
AGGAACAGACAGCTCTGAAAGACTGAAACTCACGGCCATGGCCATCCTGGGTGCCCTCAGGCTCGCGCCGTCTCCACCCGCCCTCGCCGGCGCCGCGCCACCGGCGACGTCGCCGTATACGGCTGTACGCTCCTCCGTGCACTTCCGCCTCGCCAATGCCGGCGCCGCCGCGCTCGTCGCCGCCTCGCTCCTCGCCGCCGACCCCGCCGTGGCTTTCATTGGAGGAGGACCGTACGGGAAGCAGGTGACGCGGGGGCAGGACCTCACCGGCAAGGACTTCAGCGGCCAGACACTCATCAAGCAGGACTTCAAGACGTCTATACTGAGGCAGGCGAACTTCAAAGGCGCGAACCTGCTCGGCGCGAGCTTCTTCGATGCAGACCTCACAAGCGCTGATCTCTCTGACGCTGATCTTAGAGGCGCTGATTTGTCGCTGGCGAATTTAACGAAGGCAAACTTATCAAATGCCAACTTAGAAGGGGCACTTGCCACTGGGAACACTTCTTTCAAAGGTGCCGACATAACTGGGGCAGATTTTACCGATGTGCCGCTGCGAGATGATCAACGGGAGTACCTCTGCAAAATCGCTGACGGAGTAAATTCAACCACTGGAAACCCAACAAAGGAGACTCTGTTCTGCAGCTGATCGACGGAAGGACCTGGGACTTGTGACTTATTCAACGTCTTGATAAACTTGCATCTGCTGCTGTAAGCACGTGAGGAATGTAAATTGAGTTATAGAGGGTTCCTAGAAATAATAACTGGTAATTACGTGTAAATCAACCAACAATATAAGTGTGTGCTGCCCTTTGAATGT
Zm00001eb335810_T002 from maize genome v5
Amino Acid Sequence
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MAILGALRLAPSPPALAGAAPPATSPYTAGGGPYGKQVTRGQDLTGKDFSGQTLIKQDFKTSILRQANFKGANLLGASFF
DADLTSADLSDADLRGADLSLANLTKANLSNANLEGALATGNTSFKGADITGADFTDVPLRDDQREYLCKIADGVNSTTG
NPTKETLFCS
Nucleotide Sequence
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CAGCTCTGAAAGACTGAAACTCACG...
CAGCTCTGAAAGACTGAAACTCACGGCCATGGCCATCCTGGGTGCCCTCAGGCTCGCGCCGTCTCCACCCGCCCTCGCCGGCGCCGCGCCACCGGCGACGTCGCCGTATACGGCTGGAGGAGGACCGTACGGGAAGCAGGTGACGCGGGGGCAGGACCTCACCGGCAAGGACTTCAGCGGCCAGACACTCATCAAGCAGGACTTCAAGACGTCTATACTGAGGCAGGCGAACTTCAAAGGCGCGAACCTGCTCGGCGCGAGCTTCTTCGATGCAGACCTCACAAGCGCTGATCTCTCTGACGCTGATCTTAGAGGCGCTGATTTGTCGCTGGCGAATTTAACGAAGGCAAACTTATCAAATGCCAACTTAGAAGGGGCACTTGCCACTGGGAACACTTCTTTCAAAGGTGCCGACATAACTGGGGCAGATTTTACCGATGTGCCGCTGCGAGATGATCAACGGGAGTACCTCTGCAAAATCGCTGACGGAGTAAATTCAACCACTGGAAACCCAACAAAGGAGACTCTGTTCTGCAGCTGATCGACGGAAGGACCTGGGACTTGTGACTTATTCAACGTCTTGATAAACTTGCATCTGCTGCTGTAAGCACGTGAGGAATGTAAATTGAGTTATAGAGGGTTCCTAGAAATAATAACTGGTAATTACGTGTAAATCAAC
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